(Hypertension. 1997;30:326.)
© 1997 American Heart Association, Inc.
Articles |
From the Division of Epidemiology, School of Public Health, University of Minnesota, Minneapolis (L.D.A.), and the Departments of Genetics (C.M.K., P.B.S., J.E.H., J.W.M.) and Physiology and Medicine (R.E.S.), Southwest Foundation for Biomedical Research, San Antonio, Tex.
| Abstract |
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Key Words: relative pair association genetics polymorphisms
| Introduction |
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On sequencing the locus, Jeunemaitre et al1 found two variants in exon 2, a threonine-to-methionine substitution at amino acid 174 (T174M) and a methionine-to-threonine substitution at amino acid 235 (M235T), that showed statistically significant associations with hypertension. Several case-control studies3 4 5 of M235T in the Japanese population also reported an association; however, case-control studies of this polymorphism in white,2 African American,6 African Caribbean,7 and Finnish8 populations did not. Finally, Jeunemaitre et al1 showed that there were significant differences in plasma levels of AGT in subjects with different AGT genotypes.
In this study we confirmed the linkage of hypertension to the GT dinucleotide repeat by using data on Mexican American hypertensive relative pairs from a low-income barrio in San Antonio. However, using maximum-likelihood methods, we found no association of genotypes for M235T with plasma levels of AGT in this Mexican American population.
| Methods |
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Dinucleotide Repeat at the AGT
Locus
The AGT 3' dinucleotide
repeat9 was analyzed by polyacrylamide
electrophoresis of PCR amplification products produced using the
"U" primer set of Jeunemaitre et al.1 These primers
amplify an approximately 167base pair (±dinucleotide
insertions/deletions) fragment of the human AGT gene.
Reaction mixtures of 25 µL total volume contained approximately 250
ng of sample DNA, 10 mmol/L Tris-HCl (pH 8.3), 50
mmol/L KCl, 1.5 mmol/L MgCl2, 10% DMSO,
0.001% gelatin, 125 µmol/L (each) dNTPs, 0.25
µmol/L (each) unlabeled primers,
0.05 pmol 32P
end-labeled (
0.75 µCi/pmol) upstream primer, and 0.5 U
Taq polymerase (Perkin-Elmer Cetus). Touchdown PCR was
performed in microtiter plates with a GeneAmp PCR System 9600
thermocycler (Perkin-Elmer), according to the following protocol: an
initial denaturing step of 4 minutes at 94°C was conducted, followed
by five cycles comprising a 15-second denaturation step at 94°C, a
15-second annealing step (starting at 72°C for the initial cycle and
decreasing by 2°C in each subsequent cycle for a final temperature of
64°C in the fifth cycle), and a 30-second elongation step at 72°C.
These cycles were followed by 31 cycles of 15 seconds at 94°C, 15
seconds at 62°C, 30 seconds at 72°C, and a final 5-minute
elongation step at 72°C before cooling to 4°C. Subsequent to PCR
amplification, 8 µL of denaturing/loading dye solution (98%
deionized formamide, 10 mmol/L EDTA, 0.05% xylene cyanole,
and 0.05% bromphenol blue, in water) was added to each reaction well.
These mixtures were heated and held at 95°C for 5 minutes, then
cooled to 4°C. The cooled reaction mixtures (6 µL of each) were
applied to a well of denaturing polyacrylamide gel (8%
acrylamide [1:19 bis-acrylamide], 0.09
mol/L Tris, 0.09 mol/L boric acid, 0.02 mol/L
EDTA, 7 mol/L urea) and separated at 1250 V (constant) for 5
hours. After electrophoresis, gels were dried and exposed to Kodak XAR
film (with one intensifying screen) for 2 days to produce
autoradiographic records.
M235T and T174M Variants of the AGT
Locus
The M235T polymorphism was typed by PCR amplification of
lymphocyte DNA with a mismatched reverse primer and cleavage with
Tth111I as described by Russ et al.10 The T174M
polymorphism was typed by PCR amplification of AGT exon
2 sequences as previously described by Hixson and Powers11
and cleavage with Nco I. The Met allele contains an
Nco I site (CC ATG G), and the Thr allele
lacks the site (CC ACG G).
Genotyping of the M235T and T174M variants was performed earlier in the process of gathering individuals for the SAFHS than genotyping of the GT dinucleotide repeat; therefore, the total is smaller. Also, we stopped genotyping T174M early, when it became obvious that it was not informative. Heterozygosity and allele frequencies for each of the three polymorphisms are reported in Table 2.
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Assays of Plasma Levels of AGT
AGT levels in plasma were measured using a two-step procedure
consisting of conversion of AGT to angiotensin I by adding
primate renin in excess followed by measurement of
angiotensin I by radioimmunoassay.12 The
incubation buffer for the first step (0.6 mol/L sodium
phosphate, pH 6.0, 36 mmol/L EDTA, 1 mg/mL gelatin)
was boiled and then cooled to room temperature to eliminate protease
activity. Baboon renin was prepared by method A as described by Haas et
al.13 The conversion of AGT to angiotensin I
was accomplished by incubating 0.25 mL of buffer with 20 µL of the
renin preparation, 5 to 10 µL plasma, and water added to 1 mL for 3
hours at 37°C. Each batch of baboon renin routinely released all of
the angiotensin I in 5 µL of human plasma within 1.5
hours under these incubation conditions. Aliquots were then assayed for
angiotensin I generated by a commercially available
radioimmunoassay kit (RIANEN, Du Pont). Blank controls containing renin
but no added plasma, and a control plasma pool were included within
each set of assays. This procedure was performed three times on 519
individuals in 46 extended families. If the coefficient of variation of
the three readings was greater than 0.10 for any individual, then the
entire assay was repeated for that individual. The plasma AGT level
reported was the average of the three readings.
Statistical Analysis
We performed nonparametric linkage analyses
by using data on affected pairs of relatives only, thereby avoiding
problems of incomplete penetrance and variable age of onset. The
statistical test used, known as simIBD, was based on all affected
relative pairs (for example, parent-offspring, uncle-niece) and was
thus ideal for our large extended families. Linkage methods based on
IBD sharing were recently shown14 to be more powerful than
the methods based on identity by state used by Jeunemaitre et
al1 and Caulfield et al.2 Using strictly
sibling pair tests would have severely reduced our sample size, making
the results unreliable.
The program simIBD computes a similarity statistic that is a weighted sum of the IBD probabilities. The significance of this statistic is determined empirically by using a null distribution that is calculated using simulation methods.14 15 16 17 This null distribution is simulated by first assuming that the affected individuals are untyped at the marker locus and then randomly generating genotypes at the marker locus for the affected individuals conditional on the genotypes of the unaffected individuals. The similarity statistic is then computed by using the generated random genotypes. This process is repeated 1000 times, and it is these 1000 simulated similarity statistics that form the empirical null distribution.
Jeunemaitre et al1 suggested on the basis of a
case-control study that the M235T polymorphism is associated with
essential hypertension. They also performed an analysis of
variance, which showed that the different M235T genotypes were
associated with different plasma levels of AGT, a quantitative trait. A
case-control test of association between M235T genotypes and
hypertension was invalid in our dataset owing to the inherent familial
correlations; however, a test of association between plasma levels of
AGT and M235T genotypes, using likelihood methods that
incorporate the effects of residual familial correlation, was possible.
We proceeded as follows. After excluding all individuals who were
taking hypertensive medication, oral contraceptives, or other hormones
(which reduced the sample size to 448), we initially used likelihood
methods to estimate any significant effects of polygenes (ie,
heritability) and environmental factors. These factors included BMI,
physical activity, cigarette and alcohol consumption, and dietary
consumption of protein, fat, carbohydrates, fiber,
cholesterol, and sucrose. Incorporating heritability in the
underlying model accounts for the nonindependence of individuals in the
pedigrees. We then performed measured genotype
analysis18 to determine whether genotypes
of M235T were associated with different levels of AGT in plasma. Any
significant covariates from the initial analysis were included
in the measured genotype analysis. The GT
dinucleotide repeat was not tested owing to the large
number of genotypes. The T174M variant was considered
uninformative owing to low heterozygosity. We computed the maximum
likelihood of two models; the general model assumed that AGT levels
were associated with M235T genotypes (ie, the three genotypic
means differ) and the subset model assumed that AGT levels were not
associated with M235T genotypes (ie, the three genotypic means
were equal). Twice the difference in the two maximum likelihoods was
assumed to be distributed as a
2 distribution
with 2 df. This procedure was carried out using the computer
program package PAP.19
| Results |
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Results of the measured genotype test of association are shown in Table 4. Of the factors initially tested for their effects on plasma levels of AGT, only BMI was significant (P<.0001). BMI was therefore included in the measured genotype analysis, along with sex, linear and quadratic age effects (which are known to affect blood pressure), and heritability. The measured genotype analysis showed that genotypes at M235T were not significantly associated with plasma levels of AGT (P=.43). A measured genotype analysis of the effect of M235T on blood pressure (both systolic and diastolic), with treated hypertensives excluded, was also not significant (results not shown).
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| Discussion |
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In this study of extended Mexican American families, we confirmed the linkage between the highly polymorphic GT repeat and essential hypertension. At best, we found only marginal linkage between M235T and hypertension. Logically, it has to be linked if the GT repeat is linked. This seemingly paradoxical result can be explained by the low heterozygosity (0.43) of the M235T polymorphism and the smaller number of individuals that were typed for this polymorphism. These two factors would reduce the power to detect linkage to M235T. We note, however, that when individuals taking hormones were removed from the dataset, the test for linkage to M235T reaches marginal significance. This result would be expected if the individuals taking hormones represent hypertension "phenocopies" whose presence would reduce the power to detect true linkage.
It should also be emphasized that this study was conducted using a population-based random sample. It therefore had less power to detect linkage to hypertension than a sample of similar size ascertained on hypertension. Conversely, inferences to the general population based on this random sample would be valid, whereas general inferences from an ascertained sample would be more problematic.
Jeunemaitre et al1 also reported that the linkage with the AGT locus was stronger among individuals with more severe hypertension and among males. However, Caulfield et al2 did not find any significant differences between sexes or with increasing severity of hypertension after stratifying their families according to sex and severity of hypertension. We have large extended families with approximately five affected members per family and are therefore unable to stratify our families by sex or severity and can provide no information about their effect on linkage of hypertension to the AGT locus.
Our failure to find an association between M235T and plasma levels of AGT may be due to the exclusion of hypertensives on medication. These individuals could be expected to have a higher frequency of the T allele, and excluding them might lower the overall frequency of T. However, a comparison of the frequency of the T allele in Tables 2 and 4 shows that it did not decrease significantly, indicating that the exclusion does not bias the measured genotype analysis.
The lack of an association between M235T and AGT levels in this study and between M235T and essential hypertension in the report by Caulfield et al2 does not detract from the finding of linkage. Genetic association studies require that the polymorphism under study be either the genetic lesion that causes a defect or in strong linkage disequilibrium with the genetic lesion. In the latter case, the results of association studies would be population specific. However, the absence of an association between a specific polymorphism and a disease in different populations would indicate that this specific polymorphism is not the critical genetic lesion.
Linkage of hypertension to the AGT locus has now been shown in three white populations, one black population, and one Mexican American population. These results strongly reinforce the hypothesis that AGT, or another closely linked locus, affects essential hypertension. However, the exact location and nature of the genetic lesion that contributes to hypertension is still unknown.
| Selected Abbreviations and Acronyms |
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| Acknowledgments |
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| Footnotes |
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Received September 18, 1996; first decision October 11, 1996; accepted February 18, 1997.
| References |
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