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(Hypertension. 2007;49:96.)
© 2007 American Heart Association, Inc.
Original Articles |
From the Departments of Psychiatry (B.K.R., N.J.S.), Pharmacology (P.A.I., D.T.O.), Computer Science and Engineering (S.H.P.), and Medicine (P.A.I., M.G.Z., D.T.O.), Polymorphism Research Laboratory (B.K.R., N.J.S.), and Center for Human Genetics and Genomics (N.J.S., D.T.O.), University of California at San Diego; the Department of Molecular and Experimental Medicine (E.B.), Scripps Research Institute, La Jolla, Calif; and Sequenom (K.A.), San Diego, Calif.
Correspondence to Daniel T. OConnor or Nicholas J. Schork, Department of Medicine (0838), University of California at San Diego School of Medicine and VASDHS, 9500 Gilman Dr, La Jolla, CA 92093. E-mail doconnor{at}ucsd.edu or nschork@ucsd.edu
| Abstract |
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60 000 genotypes in the subjects: 48 single nucleotide polymorphisms at 33 autosomal and 2 X-linked genes in adrenergic and renal pathways that regulate blood pressure. Six individual variants significantly affected blood pressure and demonstrated gene-by-gender interaction, yielding different effects of the single nucleotide polymorphism on blood pressure in males and females. In females, polymorphisms at ß1-adrenergic receptor and
2A-adrenergic receptor contributed to blood pressure, whereas in men, polymorphisms at ß2-adrenergic receptor and angiotensinogen were associated. An
2A-adrenergic receptor haplotype influenced blood pressure in women, whereas 2 angiotensinogen haplotypes were associated in men. We also detected gene-by-gene, gender-specific interactions (epistasis) in pathophysiological pathways. This study reveals gender-specific effects of single nucleotide polymorphisms, haplotypes, and gene-by-gene interactions that determine blood pressure in white Americans. Such genetic variants may define genetically and etiologically distinct subgroups of men and women with essential hypertension and may have implications for rational treatment selection.
Key Words: gender polymorphism epistasis essential hypertension blood pressure adrenergic receptors
| Introduction |
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2-adrenergic agonists,36 but the potential interaction of gender and heredity in the determination of elevated blood pressure (BP) is incompletely understood. The gender of a subject is generally accounted for, usually as a covariate, in association studies, but more recently, studies have begun to identify both autosomal genes and genes involved in sexual dimorphism that differentially contribute to multifactorial traits/diseases or are differentially expressed in tissues in males versus females. For example, Nakayama et al7 identified a genetic variant in the follicle-stimulating hormone receptor that may contribute to essential hypertension in females. Peter et al8 identified evidence of gender-specific contributions of estrogen-related genes to BP variation. A study of black youth revealed that both systolic BP levels and diastolic BP (DBP) levels were lower in carriers versus noncarriers of the Met 235 allele of the angiotensinogen gene, and this occurred in a gender-specific manner.9 Studies in mice have shown that a large number of genes, both autosomal and on sex chromosomes, display gender-specific differences in their pattern of tissue expression.10 Given this growing body of evidence of a differential role of gender on genetic expression of complex traits, including BP, we systematically investigated the interaction of gender with genetic variants in contributing to BP.
To test the gender dependence of heritable influences on BP, we exploited the statistical power that is possible with a very large sample size. Accordingly, we selected individuals through a sampling design with the power to detect small contributions to BP variation, ascertaining individuals within the highest and lowest 5th percentiles of BP in a primary care setting in southern California with a large community database (>53 000 subjects) of men and women whose BP was measured at routine health maintenance visits.
We then tested the relationship of these BP extremes with 35 loci that have physiological roles in the regulation of BP through the kidney, by components of the reninangiotensin system and by adrenergic pathways that are activated by catecholamines (Figure IA and IB, available online at http://hyper.ahajournals.org). We, thus, explored a role for gender in the contribution of polymorphism at key renal and adrenergic loci to elevated BP. The data demonstrate pronounced gender effects on the genetic contributions of haplotypes, as well as gene-by-gene (epistatic) interactions.
| Methods |
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BP was measured in seated subjects using aneroid sphygmomanometry. If DBP was elevated, repeat measurement was obtained. Blood for preparation of genomic DNA was obtained with informed consent, and samples were anonymized.
Subject Selection Criteria
Men and women were selected from the highest and lowest (extreme) percentiles of DBP distribution. Subjects were ascertained by using DBP as the trait, because twin and family studies provide evidence that DBP is substantially heritable.1315 Ethnicity, defined by self-identification, including that of both parents and all 4 grandparents, was specified as white (European) ancestry. Subjects in the upper DBP percentiles were diagnosed with hypertension based on repeated BP measurements and did not have renal failure (serum creatinine concentration was
1.5 mg/dL in 98.6% of subjects). Ages of subjects at the lower extreme did not significantly differ from those selected from the upper extreme. Among the women, 311 with higher DBP (
92 mm Hg) met the selection criteria and had values in the upper 4.5 percentile of the overall DBP distribution, whereas 345 were ascertained on the basis of a lower DBP value <60 mm Hg, representing the lower 4.8 percentile. Among the men, 343 were ascertained with higher DBP (
96 mm Hg), representing the upper 4.9 percentile of the overall male DBP distribution, whereas 268 were ascertained with lower DBP values corresponding with the lowest 4.2 percentile (<61 mm Hg).
Elevated DBP values were verified by repeated BP measurements; 48% of these hypertensive subjects reported being prescribed and taking
1 antihypertensive drug. Subjects in the lower DBP group did not have histories of hypertension or use antihypertensive drugs. Table 1 summarizes the phenotypes.
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Genotyping
Single nucleotide polymorphism (SNP) sequences were obtained from the public SNP database (http://www.ncbi.nih.nlm.gov/SNP) or by sequencing (Table 2
). Genomic DNA was typed using a matrix-assisted laser desorption ionization time-of-flight mass spectrometry system developed by Sequenom according to a published protocol.16,17 Reproducibility of genotyping was verified with 50 blinded replicate samples.
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Power Analysis
Power calculations were performed using the online genetic power calculator for quantitative trait loci (http://statgen.iop.kcl.ac.uk/gpc/)18 according to the method described by Schork et al.19 The power of an association study on the extreme samples was computed under varying disease allele frequencies for type I error rate
of 0.05, 0.001, or 0.00000001 ("genome-wide" level), for recessive, additive, and dominant models of inheritance, respectively, using proportion of variance of BP explained by the locus at 0.5%, 1%, 2.5%, and 5% and assuming the marker locus is the actual trait locus (D'=1.0). We determined that this sample has >90% power to detect genotype association with a trait when the genotype contributes as little as 3% to the total variation in men; the power is even higher in the female cohort.
Statistical Analysis
Univariate ANOVA determined the significance of differences observed in DBP measurements between individuals from the high and low BP groups. Two-way ANOVA (covariates: age and body mass index) was used to assess interaction effects of gender and SNPs on DBP, as well as epistatic interactions of 2 genes. Phylogenetics and Sequence Evolution software package and SNPEM were used to infer haplotypes from diploid genotypes for each individual.2022
Resampling methods were used to compute the probability that observed associations were not likely because of chance given the number of statistical tests that we pursued.23 DBP values were independently permutated 500 times to generate an empirically derived distribution of test statistics (ie, ANOVA F test statistics). The observed test statistics were compared with the empirically derived distributions of test statistics to derive P values.
| Results |
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Gender-Specific Allele Contributions to DBP: Gene-by-Gender Interactions
Of 48 SNPs, 2 (at ADRB2 and AGT) influenced BP only in men, whereas 2 (at ADRA2A and ADRB1) contributed only in women (Figure 1
). All 4 SNPs demonstrated significant gender-by-gene interaction effects on BP. Two other SNPs, a second one at AGT (3' untranslated region [UTR] +453 c
a) and one at PNMT (184 a
g) also showed significant gene-by-gender interaction, but their effects were not significant in either men or women alone.
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ADRB2 (Arg16Gly) showed a significant gene-by-gender effect on DBP (P<0.020). In men, the codon 16 Arg allele contributed to DBP (P<0.002) in an apparently recessive mode of inheritance: Arg/Arg homozygotes had
6 mm Hg greater DBP than either Arg/Gly heterozygotes or Gly/Gly homozygotes (Figure 1
A). Women showed no significant contribution of this ADRB2 SNP to BP; indeed, the female DBP trend was directionally opposite from the male effect of the Arg allele (Figure 1
A). Furthermore, permutation analysis was performed for each SNP association test to compute the probability that observed associations are not likely because of chance because of the large number of statistical tests conducted in this study. In the permutation test, DBP values were independently permutated 500 times to generate an empirically derived distribution of test statistics (ANOVA F test statistics) for each SNP. The observed test statistics from the single SNP association test were compared with the empirically derived distributions of test statistics to derive permutation test P values. For ADRB2 (Arg16Gly) in men, only 2 of the 500 permutations resulted in test statistics almost as extreme as our observed test statistic, providing a significance of P<0.004 through the permutation test.
A gene-by-gender interaction was also significant (P<0.03; permutation test P<0.015) for ADRA2A (1297 c
g). Men carrying 2 copies of the 1297 c allele tended toward higher DBP, whereas women with 2 copies of the other allele (1297 g) had significantly (P<0.03; permutation test P<0.04) higher DBP than women carrying 1 or no 1297 g alleles (Figure 1
B). A second SNP at ADRA2A, in the 3' untranslated region of the gene, ADRA2A (+427 g
a), did not associate with BP in either gender.
A significant (P<0.02; permutation test P<0.01) gene-by-gender interaction on DBP occurred at ADRB1 (Ser49Gly). In women, individuals with 2 Gly alleles had significantly higher DBP (P<0.04; permutation test P=0.056) than individuals with 1 or no Gly alleles (Figure 1
C). In men, a contribution of this SNP was not observed; indeed, the trend was directionally opposite.
We noted a strong (P<0.002; permutation test P<0.0001) gene-by-gender interaction on DBP for AGT Met235Thr and a moderate (P<0.04; permutation test P<0.02) effect for the 3'-UTR AGT (+435 a
c) variant (Figure 1E and 1
F). Although men carrying 1 or 2 copies of the codon 235 Thr allele had higher DBP than men with no copies of that allele, women showed an opposite trend with lower DBP when carrying 1 or 2 copies of 235 Thr. A trend for AGT (+435 a
c) alleles contributing in opposing fashion in men and women was also observed (Figure 1E and 1
F).
Effect of Antihypertensive Medication on Genetic Association
Because the use of antihypertensive medication may confound the association of genetic variants with BP, we explored the effects of medication use on our SNP association results: 48% (51% female and 45% male) of the high DBP subjects were taking
1 antihypertensive medications. We first reanalyzed for SNP association in individuals not taking antihypertensive medication: the ADRB2 (Arg16Gly) association remained significant (P<0.006) in men, with the codon 16 Arg allele contributing to DBP in a similar recessive mode of inheritance as when subjects taking antihypertensive medication were included. After exclusion of male subjects taking antihypertensive medication, the mean DBP for each genotype was reduced: average DBP in subjects carrying 2 Arg alleles was 80.2±2 mm Hg, 1 Arg allele was 72±2 mm Hg, and 0 Arg alleles was 75.6±1 mm Hg (compare data in Figure 1
A). Women showed no significant contribution of this ADRB2 SNP to BP whether or not subjects treated for hypertension were included. We assessed the average DBP of men taking antihypertensive medication within each ADRB2 (Arg16Gly) genotype and found no significant difference in average DBP among the different genotypes with average DBP for each genotype 101±0.6 mm Hg. However, among the male subjects with high DBP, there were proportionately more (P<0.05,
2) subjects on antihypertensive medication that carried the Arg allele: 36%, 35%, and 29% of subjects on antihypertensive therapy were Arg/Arg, Arg/Gly, or Gly/Gly, respectively, whereas 29%, 29%, and 42% of subjects not being treated with antihypertensive medications were Arg/Arg, Arg/Gly, or Gly/Gly, respectively.
The observed association of the AGT Met235Thr SNP in men remained significant (P=0.039) when individuals on BP medication were excluded from the analyses: average DBP in men carrying 2 Thr alleles was 77.2±2 mm Hg; 1 Thr allele was 77.3±1 mm Hg; and no Thr alleles was 72.5±1 mm Hg. Among the 3 AGT genotypes, the proportion of men with high DPB who were or were not taking antihypertensives was not significantly different from those not being treated. No association at AGT was found in women whether we included or removed from the analysis individuals receiving antihypertensive medication.
Because of the low frequency of the ADRB1 Gly allele (Ser49Gly) and the g allele of the ADRA2A (1297 c
g), we were not able to analyze the data set for these 2 SNPs after excluding female subjects on antihypertensive medication. However, we reanalyzed the data using the method of Cui et al24,25 in which DBP is additively adjusted depending on the number of antihypertensive drug classes that a subject receives. Using this method, we found that women with 2 copies of the 1297 g alleles had significantly (P=0.026) higher DBP than women carrying 1 or no 1297 g allele, with results concordant with the findings above in which subjects were assessed irrespective of whether they received antihypertensive medication. Using the same approach and in accord with findings above, we found that women with 2 Gly alleles of the ADRB1 (Ser49Gly) SNP had significantly higher DBP (P=0.046) than individuals with 1 or no Gly alleles.
Haplotype and Gender Interactions
Two or more common variants were genotyped at the ADRA2A, ADRB1, PLCB1, AGT, GPRK4, and ROCK2 loci, allowing the inference of haplotypes by 2 different algorithms (PHASE and SNPEM). The 2 approaches gave congruent results: 3 common and 1 rare haplotype of the 4 (22) possible haplotypes at PLCB1, 4 common haplotypes at AGT, and 3 common haplotypes at ADRA2A and ADRB1 (Table 3). These autosomal haplotype frequencies were not different in men and women. The AGT and ADRA2A haplotypes contributed significantly to DBP, showing significant gender-by-haplotype interactions at these loci (Figure 2). The PLCB1, GPRK4, and ROCK2 haplotypes did not contribute to DBP or systolic BP.
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Haplotype analysis (Figure 2A and 2B) clarified the trend for association that was observed for the 2 AGT SNPs using single-SNP association tests (see Figure 1E and 1
F discussed above). Men carrying the common AGT/B haplotype (Met at codon 235 and adenine [a] at 3'UTR [+435 a/c]), had lower DBP (P<0.012) in a gene dose-dependent manner (Figure 2A), suggesting an additive mode of inheritance for the AGT/B haplotype effect on DBP. By contrast, men carrying 1 or 2 copies of the common haplotype (AGT/A) with opposite alleles at the same SNP positions (Thr at codon 235 and cytosine [c] at the 3'-UTR [+435 a/c]) had significantly higher DBP (P<0.004) than men having no copies of this haplotype, indicating a dominant mode of inheritance (Figure 2B). Remarkably, the same AGT haplotype (AGT/A) that conferred increased DBP in men showed a trend toward lower DBP in women. The AGT/A haplotype demonstrated a strong (P<0.001) gender-by-haplotype effect on DBP, whereas the AGT/B haplotype showed a moderate gender-by-haplotype effect (P<0.020).
The ADRA2A/A haplotype had a significant (P<0.04) gender-by-haplotype effect on DBP (Figure 2C). Women with 1 or 2 copies of this haplotype had significantly lower DBP (P<0.04), implying a dominant mode of inheritance (Figure 2C).
The ADRB1/C haplotype demonstrated significant (P<0.02) gender-by-haplotype effects on DBP (Figure 2D). Similar to our observation with ADRA2A/A, women with 1 or no copies of this haplotype had significantly lower DBP (P<0.05). In men, the presence of 1 or 2 copies of this haplotype showed an opposite trend, that is, toward higher DBP.
Gene-by-Gene Interactions in Physiological Pathways: Epistasis
Of all 595 possible gene-by-gene pairs (n[n1]/2=35x34/2=595), only 2 showed significant interactive contributions to DBP (Figure 3), and in each case the gene-by-gene interaction depended on gender stratification. Two of 595 represent fewer significant interactions than might be expected by chance alone at the
=0.05 level (595/20=
30;
2=13.4; degrees of freedom = 1; P=0.0003). However, our sample size was selected for adequate power to detect marker-on-trait associations19 rather than marker-by-marker interactions to affect traits; hence, our study may not have sufficient statistical power to detect all of the pertinent gene-by-gene interactions.
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REN and ACE encode enzymes in series within the angiotensin pathway. Neither the REN (intron 4, 131 g
t) SNP nor the ACE (intron 24, 6 g
a) SNP alone contributed to BP in our population; however, the interaction of these 2 SNPs together contributed significantly (P<0.007) to DBP in men (Figure 3A) but not women (P=0.268). Specifically, the REN t allele seems to lower DBP, but only on a background of ACE a/a homozygosity. The interaction effect of gender with this SNPSNP pair was also significant (P<0.01), suggestive of a gender-specific gene-by-gene interaction.
GNAS and ADRA1A function in parallel adrenergic receptor pathways, and the pattern of epistatic effects also differed between men and women with a significant interaction of gender with this SNPSNP pair (P<0.03). Although the GNAS (Ile131Ile) and ADRA1A (Arg347Cys) SNPs did not independently associate with DBP in women, the interaction of these SNPs significantly contributed to DBP (P<0.04) in women (Figure 3B) but not men (P=0.375).
| Discussion |
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Unique Strengths of This Study
To avoid such problems in identifying genetic variants associated with BP, we took advantage of a combination of several methods: population BP extremes, sampling of both men and women, haplotype structures, and physiological pathway approaches. The power of this study lay in the population-based ascertainment of a very large number of phenotyped individuals.
We sampled men and women from the extremes of diastolic BP among >53 000 people in a large community-based health maintenance system.11 The use of extremes is a powerful approach both theoretically, as well as practically, in genetic association studies.19,26,32 Schork et al19 proposed a statistical methodology in which one determines thresholds for sampling from phenotypic extremes and suggested a method for assessing the power of such samples for candidate loci association tests. Using this approach, we estimate that our sample had
90% power to detect loci that contribute as little as 3% to population BP variance.
Haplotype-Based BP Associations
If a disease-causal SNP is not in linkage disequilibrium (LD) with the marker/analyzed SNP, association may be missed by single SNP association tests. However, when multiple SNPs exist in a particular gene, haplotype-based studies can be more powerful than single SNPs to define genetic association.33 We, therefore, genotyped
2 SNPs at 6 of the 35 candidate genes to infer haplotypes. Consistent with the theoretically demonstrated increased power for haplotype-based association tests, we observed that haplotypes formed by the 2 AGT SNPs showed stronger association with DBP (Figure 2A and 2B) than was observed with either of the 2 individual-SNP association tests (Figure 1E and 1
F). Superior association by a particular haplotype might suggest either that both SNPs contribute to the observed effect or that another (as-yet unstudied) SNP in LD with the measured SNPs confers the effect on DBP. Our data cannot distinguish these 2 possibilities.
Role of Gender
Our results reveal a major role for gender in the genetic determination of BP. Consistent with known differences in BP between males and females,3437 we found a significant effect of gender alone on DBP in the population extremes. Of additional note is the observation that genes showing association with BP variation differ markedly in effect between males and females (Figure 1
). Furthermore, we documented several examples wherein particular alleles were observed to show directionally opposite effects on DBP in males versus females (Figure 1A1C, 1E, and 1
F).
One of the most prominent gender differences in contribution to DBP was observed with the ADRA2A (1297 c
g) variant, located in the promoter 1297 nucleotides upstream of the start codon for ADRA2A, which encodes the
2A-AR (Figure 1
B). Haplotype results (Figure 2C) were compatible with the single SNP results. Because single SNP analysis at ADRA2A (3'UTR +427 g
a) did not show an effect on DBP, the effect might be attributed to either ADRA2A (1297 c
g) or another (as yet undetermined) variant in close linkage disequilibrium with 1297 c
g. Indeed, 14 polymorphic sites in the white American population have been reported recently within the 5-kb region of the ADRA2A gene, including ADRA2A (1297 c
g) and 3'UTR +427 g
a, and evidence suggests that haplotypes containing ADRA2A (1297 c
g) and 3'UTR +427 g
a alter mRNA and/or protein expression.38
The difference in association of the ADRA2A (1297 c
g) SNP with DBP in men versus women (Figure 1
B) may help explain previous physiological/pharmacological observations on differential
2-adrenergic control of the circulation. For example, King et al39 demonstrated that men and women respond differently to a selective
2-adrenergic receptor agonist, azepexole.39 In that study, women showed a major "presynaptic" vasodilatory effect to agonist at therapeutic levels, whereas this effect was absent in men. Kneale et al6 have also demonstrated differential vasoconstriction and selectivity to adrenergic agonists in men versus women.
We also observed a role for gender in the contribution of an AGT SNP to DBP (Figures 1E, 2A, and 2![]()
B). The 235Thr variant was first implicated in hypertension by Jeunemaitre et al.40 Our studies are consistent with that report: we found that the 235Thr variant, in either the homozygous or heterozygous state, contributes to elevated DBP in men (Figure 1E and 1
F) and that both the 235Thr variant and the AGT haplotype containing 235Thr and the c allele of the 3' UTR +435 c
a SNP had even stronger association with DBP; we observed a gender effect on the contribution of the 235Thr variant, either alone or as a part of the AGT/A haplotype, with a directionally opposite effect on DBP in men versus women (Figure 2A and 2B).
Epistasis/Pathways/Gene-by-Gene Interactions
Our candidate gene approach that tested loci encoding molecules in the adrenergic and renin/angiotensin pathways allowed us to assess for gene-by-gene (epistatic) interactions. Of 595 possible gene-by-gene combinations among variants at the 35 loci analyzed, only 2 interactions (REN and ACE and GNAS1 and ADRA1A) were identified, both with gender effects as well. REN and ACE illustrate an interaction between components of a pathway in series (Figure 3A): men carrying 2 t alleles at REN (intron 4, 131 g
t) and
1 adenine allele at ACE (intron 24, 6 g
a) had significantly lower DBP than other men. Other components of this pathway (AGT and AGTR1) did not display such gene-by-gene interactions, although our sample size was not sufficiently powered to permit analysis of 3-way (gene-by-gene-by-gene) interactions.
Another gene pair displaying both gene-by-gene and gene-by-gender interaction likely functions in parallel pathways: ADRA1A (
1A adrenergic receptor) and GNAS1 (Figure 3B). Although ADRA1A couples to G proteins other than Gs, these 2 gene products likely have related (albeit parallel) functional impacts in vascular smooth myocytes (online supplement Figure IA), wherein norepinephrine activates
1A adrenergic receptors to trigger vasoconstriction, and ß2 adrenergic and certain other receptors promote vasodilation via their ability to activate GNAS1. Thus, either series (Figure 3A) or parallel (Figure 3B) physiological pathways can harbor genetic effects with epistatic contributions.
Conclusions and Perspectives
Although our phenotyping protocol was simple, this study coordinately harnessed several complementary approaches to identify polymorphisms contributing to BP variation: quantitative trait extremes in a large community-based population, physiological pathway genotyping, haplotyping, and gender representation. The results identified novel evidence of gender- on-gene contributions to BP, as well as pathway-dependent gene-by-gene interactions on the trait. Extensive candidate genotyping also identified novel variants not implicated previously in elevated BP. The results reinforce the pivotal role of gender in complex cardiovascular traits and illustrate how gender can act much like a prism to refract genotype in very different ways toward disease determination. The results imply that development of genotype-based diagnostic and therapeutic indices for hypertension must take gender into account to provide an accurate assessment of the role of genes in the origin, treatment, and consequences of this complex trait.
| Acknowledgments |
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This study was supported by grants HL58120, HL69758, and RR00827 from the National Institutes of Health.
Disclosures
None.
Received June 12, 2006; first decision July 5, 2006; accepted October 31, 2006.
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